Note that PDBinder runs only on Linux-based Operative Systems (it has been successfully tested on OpenSuse and Ubuntu Linux distributions). From here you can download a compressed folder with all you need within:

1 - The main script with all the file needed to run.
2 - a README.txt file, with the usage instructions.

3 - integrated, ready-to-use, superpose3D.

4 - a PDB folder containing the set of protein structures used by PDBinder (see References). Please do not modify the content of this folder because the method could be compromised.

Click here to download the 32bit version.

Click here to download the 64bit version.